Master index | Index for Mateda2.0/functions/protein

# Index for Mateda2.0/functions/protein

## Matlab files in this directory:

CallBackTracking |
CheckConstraint | [Overlappings,Pos] = CheckConstraint(Pos,pos,vector)
CreateFibbInitConf | Translates the vector to the positions in the grid
EvalChain | [Collisions,Overlappings,Pos] = EvalChain(vector)
EvalChainFunctional | Given a chain of molecules, calculates the numer of Collisions with
EvaluateEnergy | EvaluateEnergy: Evaluates the energy corresponding to the sequence lattice configuration determined by the lattice in vector.
EvaluateEnergyFunctional | [energy] = EvaluateEnergyFunctional(vector)
EvaluateOffHPProtein | [Evals] = EvaluateOffHPProtein(Pop)
HP_newrepairing | HP_newrepairing: An auxiliary function that modifies a sequence configuration to avoid self-intersections
HP_repairing | [NewPop] = HP_repairing(Pop,Card,repairing_params)
MakePajekGraphOfProtein | [Pos] = MakePajekGraphOfProtein(vector)
NewFeasible | NewFeasible evaluates if a given move is feasible.
OffFindPos | OffFindPos translates the vector of angles to the positions into the lattice.
OffPrintProtein | [] = OffPrintProtein(vector)
PrintProtein | [Pos] = PrintProtein(vector)
PutMoveAtPos | PutMoveAtPos: updates the lattice given a mov